Controlling DNA Bundle Size and Spatial Arrangement in Self-assembled Arrays on Superhydrophobic Surface
Corresponding Author: Massimiliano Papi
Nano-Micro Letters,
Vol. 7 No. 2 (2015), Article Number: 146-151
Abstract
The use of superhydrophobic surfaces (SHSs) is now emerging as an attractive platform for the realization of one-dimensional (1D) nanostructures with potential applications in many nanotechnological and biotechnological fields. To this purpose, a strict control of the nanostructures size and their spatial arrangement is highly required. However, these parameters may be strongly dependent on the complex evaporation dynamics of the sessile droplet on the SHS. In this work, we investigated the effect of the evaporation dynamics on the size and the spatial arrangement of self-assembled 1D DNA bundles. Our results reveal that different arrangements and bundle size distributions may occur depending on droplet evaporation stage. These results contribute to elucidate the formation mechanism of 1D nanostructures on SHSs.
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- B. Su, Y. Wu, L. Jiang, The art of aligning one-dimensional (1D) nanostructures. Chem. Soc. Rev. 41(23), 7832–7856 (2012). doi:10.1039/c2cs35187k
- Y. Xia, P. Yang, Y. Sun, Y. Wu, B. Mayers, B. Gates, Y. Yin, F. Kim, H. Yan, One-dimensional nanostructures: synthesis, characterization, and applications. Adv. Mater. 15(5), 353–389 (2003). doi:10.1002/adma.200390087
- C.S. Torres, Alternative Lithography: Unleashing the Potentials of Nanotechnology (Kluwer Academic/Plenum, New York, 2003)
- A. Shahmoon, O. Limon, L. Businaro, G. Ciasca, Y. Azugi, A. Gerardino, Z. Zalevsky, Fabrication of an electro-optical Bragg modulator based on plasma dispersion effect in silicon. Microelectron. Eng. 105, 107–112 (2013). doi:10.1016/j.mee.2012.12.023
- D. Bartolo, F. Bouamrirene, E. Verneuil, A. Buguin, P. Silberzan, S. Moulinet, Bouncing or sticky droplets: impalement transitions on superhydrophobic micropatterned surfaces. EPL 74(2), 299 (2006). doi:10.1209/epl/i2005-10522-3
- M. Reyssat, J.M. Yeomans, D. Quéré, Impalement of fakir drops. EPL 81(2), 26006 (2008). doi:10.1209/0295-5075/81/26006
- H. Kusumaatmaja, M.L. Blow, A.V.J.M. Dupuis, J.M. Yeomans, The collapse transition on superhydrophobic surfaces. EPL 81(3), 36003 (2008). doi:10.1209/0295-5075/81/36003
- G. McHale, S. Aqil, N.J. Shirtcliffe, M.I. Newton, H.Y. Erbil, Analysis of droplet evaporation on a superhydrophobic surface. Langmuir 21(24), 11053–11060 (2005). doi:10.1021/la0518795
- D.H. Kwon, S.J. Lee, Impact and wetting behaviors of impinging microdroplets on superhydrophobic textured surfaces. Appl. Phys. Lett. 100(17), 171601 (2012). doi:10.1063/1.4705296
- C.W. Extrand, Model for contact angles and hysteresis on rough and ultraphobic surfaces. Langmuir 18(21), 7991–7999 (2002). doi:10.1021/la025769z
- J. Kijlstra, K. Reihs, A. Klamt, Roughness and topology of ultra-hydrophobic surfaces. Colloid Surface A 206(1), 521–529 (2002). doi:10.1016/S0927-7757(02)00089-4
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- Y. Huang, D.K. Sarkar, X.-G. Chen, Fabrication of superhydrophobic surfaces on aluminum alloy via electrodeposition of copper followed by electrochemical modification. Nano-Micro Lett. 3(3), 160–165 (2011). doi:10.3786/nml.v3i3.p160-165
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- B. Su, Y. Wu, Y. Tang, Y. Chen, W. Cheng, L. Jiang, Free-standing 1D assemblies of plasmonic nanoparticles. Adv. Mater. 25(29), 3968–3972 (2013). doi:10.1002/adma.201301003
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- G. Campi, G. Ciasca, N. Poccia, A. Ricci, M. Fratini, A. Bianconi, Controlling photoinduced electron transfer via defects self-organization for novel functional macromolecular systems. Curr. Protein Pept. Sci. 14(4), 394 (2014). doi:10.2174/1389203715666140327104023
- F. De Angelis, F. Gentile, F. Mecarini, G. Das, M. Moretti, P. Candeloro, M.L. Coluccio, G. Cojoc, A. Accardo, C. Liberale, R.P. Zaccaria, G. Perozziello, L. Tirinato, A. Toma, G. Cuda, R. Cingolani, E. Di Fabrizio, Breaking the diffusion limit with super-hydrophobic delivery of molecules to plasmonic nanofocusing SERS structures. Nat. Photonics 5, 682–687 (2011). doi:10.1038/nphoton.2011.222
- F. Gentile, M. Moretti, T. Limongi, A. Falqui, G. Bertoni, A. Scarpellini, S. Santoriello, L. Maragliano, R. Proietti Zaccaria, E. Di Fabrizio, Direct imaging of DNA fibers: the visage of double helix. Nano Lett. 12, 6453–6458 (2012). doi:10.1021/nl3039162
- L. Businaro, O. Limaj, V. Giliberti, M. Ortolani, A. Di Gaspare, G. Grenci, G. Ciasca, A. Gerardino, A. De Ninno, S. Lupi, Mid-infrared nanoantenna arrays on silicon and CaF2 substrates for sensing applications. Microelectron. Eng. 97, 197–200 (2012). doi:10.1016/j.mee.2012.02.025
- L. Di Gaspare, L.G. Ciasca, M. Pea, A. Notargiacomo, Ion and plasma based treatments for enhanced chemical speciation of metals in ferritin. Microelectron. Eng. 124, 86–89 (2014). doi:10.1016/j.mee.2014.06.003
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- M. Vassalli, F. Sbrana, A. Laurita, M. Papi, N. Bloise, L. Visai, B. Bochicchio, Biological and structural characterization of a naturally inspired material engineered from elastin as a candidate for tissue engineering applications. Langmuir 29(51), 15898–15906 (2013). doi:10.1021/la403311x
- V. Palmieri, D. Lucchetti, A. Maiorana, M. Papi, G. Maulucci, G. Ciasca, M. Svelto, M. De Spirito, A. Sgambato, Biomechanical investigation of colorectal cancer cells. Appl. Phys. Lett. 105, 123701 (2014). doi:10.1063/1.4896161
- M. Dicuangco, S. Dash, J.A. Weibel, S.V. Garimella, Effect of superhydrophobic surface morphology on evaporative deposition patterns. Appl. Phys. Lett. 104, 201604 (2014). doi:10.1063/1.4878322
References
B. Su, Y. Wu, L. Jiang, The art of aligning one-dimensional (1D) nanostructures. Chem. Soc. Rev. 41(23), 7832–7856 (2012). doi:10.1039/c2cs35187k
Y. Xia, P. Yang, Y. Sun, Y. Wu, B. Mayers, B. Gates, Y. Yin, F. Kim, H. Yan, One-dimensional nanostructures: synthesis, characterization, and applications. Adv. Mater. 15(5), 353–389 (2003). doi:10.1002/adma.200390087
C.S. Torres, Alternative Lithography: Unleashing the Potentials of Nanotechnology (Kluwer Academic/Plenum, New York, 2003)
A. Shahmoon, O. Limon, L. Businaro, G. Ciasca, Y. Azugi, A. Gerardino, Z. Zalevsky, Fabrication of an electro-optical Bragg modulator based on plasma dispersion effect in silicon. Microelectron. Eng. 105, 107–112 (2013). doi:10.1016/j.mee.2012.12.023
D. Bartolo, F. Bouamrirene, E. Verneuil, A. Buguin, P. Silberzan, S. Moulinet, Bouncing or sticky droplets: impalement transitions on superhydrophobic micropatterned surfaces. EPL 74(2), 299 (2006). doi:10.1209/epl/i2005-10522-3
M. Reyssat, J.M. Yeomans, D. Quéré, Impalement of fakir drops. EPL 81(2), 26006 (2008). doi:10.1209/0295-5075/81/26006
H. Kusumaatmaja, M.L. Blow, A.V.J.M. Dupuis, J.M. Yeomans, The collapse transition on superhydrophobic surfaces. EPL 81(3), 36003 (2008). doi:10.1209/0295-5075/81/36003
G. McHale, S. Aqil, N.J. Shirtcliffe, M.I. Newton, H.Y. Erbil, Analysis of droplet evaporation on a superhydrophobic surface. Langmuir 21(24), 11053–11060 (2005). doi:10.1021/la0518795
D.H. Kwon, S.J. Lee, Impact and wetting behaviors of impinging microdroplets on superhydrophobic textured surfaces. Appl. Phys. Lett. 100(17), 171601 (2012). doi:10.1063/1.4705296
C.W. Extrand, Model for contact angles and hysteresis on rough and ultraphobic surfaces. Langmuir 18(21), 7991–7999 (2002). doi:10.1021/la025769z
J. Kijlstra, K. Reihs, A. Klamt, Roughness and topology of ultra-hydrophobic surfaces. Colloid Surface A 206(1), 521–529 (2002). doi:10.1016/S0927-7757(02)00089-4
Y.C. Jung, B. Bhushan, Contact angle, adhesion and friction properties of micro-and nanopatterned polymers for superhydrophobicity. Nanotechnology 17(19), 4970 (2006). doi:10.1088/0957-4484/17/19/033
A. Cavalli, P. Bøggild, F. Okkels, Topology optimization of robust superhydrophobic surfaces. Soft Matter 9(7), 2234–2238 (2013). doi:10.1039/c2sm27214h
P. Papadopoulos, L. Mammen, X. Deng, D. Vollmer, H.J. Butt, How superhydrophobicity breaks down. Proc. Natl. Acad. Sci. 110(9), 3254–3258 (2013). doi:10.1073/pnas.1218673110
Y. Huang, D.K. Sarkar, X.-G. Chen, Fabrication of superhydrophobic surfaces on aluminum alloy via electrodeposition of copper followed by electrochemical modification. Nano-Micro Lett. 3(3), 160–165 (2011). doi:10.3786/nml.v3i3.p160-165
B. Su, S. Wang, J. Ma, Y. Wu, X. Chen, Y. Song, L. Jiang, Elaborate positioning of nanowire arrays contributed, by highly adhesive superhydrophobic pillar-structured substrates. Adv. Mater. 24(4), 559–564 (2012). doi:10.1002/adma.201104019
B. Su, S. Wang, Y. Wu, X. Chen, Y. Song, L. Jiang, Small molecular nanowire arrays assisted by superhydrophobic pillar-structured surfaces with high adhesion. Adv. Mater. 24(20), 2780–2785 (2012). doi:10.1002/adma.201200294
B. Su, Y. Wu, Y. Tang, Y. Chen, W. Cheng, L. Jiang, Free-standing 1D assemblies of plasmonic nanoparticles. Adv. Mater. 25(29), 3968–3972 (2013). doi:10.1002/adma.201301003
G. Ciasca, L. Businaro, M. Papi, A. Notargiacomo, M. Chiarpotto, A. De Ninno, V. Palmieri, S. Carta, E. Giovine, A. Gerardino, M. De Spirito, Self-assembling of large ordered DNA arrays using superhydrophobic patterned surfaces. Nanotechnology 24(49), 495302 (2013). doi:10.1088/0957-4484/24/49/495302
G. Ciasca, M. Papi, M. Chiarpotto, A. De Ninno, E. Giovine, G. Campi, A. Gerardino, M. De Spirito, L. Businaro, Controlling the cassie-to-wenzel transition: an easy route towards the realization of tridimensional arrays of biological objects. Nano-Micro Lett. 6(3), 280–286 (2014). doi:10.1007/BF03353792
G. Campi, G. Ciasca, N. Poccia, A. Ricci, M. Fratini, A. Bianconi, Controlling photoinduced electron transfer via defects self-organization for novel functional macromolecular systems. Curr. Protein Pept. Sci. 14(4), 394 (2014). doi:10.2174/1389203715666140327104023
F. De Angelis, F. Gentile, F. Mecarini, G. Das, M. Moretti, P. Candeloro, M.L. Coluccio, G. Cojoc, A. Accardo, C. Liberale, R.P. Zaccaria, G. Perozziello, L. Tirinato, A. Toma, G. Cuda, R. Cingolani, E. Di Fabrizio, Breaking the diffusion limit with super-hydrophobic delivery of molecules to plasmonic nanofocusing SERS structures. Nat. Photonics 5, 682–687 (2011). doi:10.1038/nphoton.2011.222
F. Gentile, M. Moretti, T. Limongi, A. Falqui, G. Bertoni, A. Scarpellini, S. Santoriello, L. Maragliano, R. Proietti Zaccaria, E. Di Fabrizio, Direct imaging of DNA fibers: the visage of double helix. Nano Lett. 12, 6453–6458 (2012). doi:10.1021/nl3039162
L. Businaro, O. Limaj, V. Giliberti, M. Ortolani, A. Di Gaspare, G. Grenci, G. Ciasca, A. Gerardino, A. De Ninno, S. Lupi, Mid-infrared nanoantenna arrays on silicon and CaF2 substrates for sensing applications. Microelectron. Eng. 97, 197–200 (2012). doi:10.1016/j.mee.2012.02.025
L. Di Gaspare, L.G. Ciasca, M. Pea, A. Notargiacomo, Ion and plasma based treatments for enhanced chemical speciation of metals in ferritin. Microelectron. Eng. 124, 86–89 (2014). doi:10.1016/j.mee.2014.06.003
G. Ciasca, L. Businaro, A. De Ninno, A. Cedola, A. Notargiacomo, G. Campi et al., Wet sample confinement by superhydrophobic patterned surfaces for combined X-ray fluorescence and X-ray phase contrast imaging. Microelectron. Eng. 111, 304–309 (2013). doi:10.1016/j.mee.2013.02.020
M. Vassalli, F. Sbrana, A. Laurita, M. Papi, N. Bloise, L. Visai, B. Bochicchio, Biological and structural characterization of a naturally inspired material engineered from elastin as a candidate for tissue engineering applications. Langmuir 29(51), 15898–15906 (2013). doi:10.1021/la403311x
V. Palmieri, D. Lucchetti, A. Maiorana, M. Papi, G. Maulucci, G. Ciasca, M. Svelto, M. De Spirito, A. Sgambato, Biomechanical investigation of colorectal cancer cells. Appl. Phys. Lett. 105, 123701 (2014). doi:10.1063/1.4896161
M. Dicuangco, S. Dash, J.A. Weibel, S.V. Garimella, Effect of superhydrophobic surface morphology on evaporative deposition patterns. Appl. Phys. Lett. 104, 201604 (2014). doi:10.1063/1.4878322